SNP View

0.46−0.01
nasaltemporalsuperiorinferiorEffect Size Heatmap: rs9330813 (effAllele: A)
1e-331e+0
nasaltemporalsuperiorinferiorP-value Heatmap: rs9330813 (effAllele: A)
350µm220µm
nasaltemporalsuperiorinferiorMean Retinal Thickness Heatmap

Grid Location View

Chromosome-log10 p-valueManhattan plot: grid location 76, 6212345678910111213141516171819202122X102030405060708090100
Position-log10 p-valueRegion plot (chr 12; rs3138142) grid location 76, 625.57e+75.59e+75.61e+75.63e+75.64e+75.66e+7102030405060708090100
Usage Guide
  • Red line in Manhattan plots are the Bonferroni corrected p-value thresholds
  • Click a heatmap to load Manhattan plots for selected macula location
  • Click a SNP in Manhattan plot to load its heatmaps and zoom on SNP
  • Search for SNPs directly or by gene, select them and see their heatmaps
  • Search by SNP position range, e.g. chr3:1-1000000 displays the first million bases of chromosome 3, counting from the p-arm telomere
  • The dynamic Manhattan plots show the sentinel and 130,000+ related SNPs.
  • The full Manhattan plot of 11 million SNPs is shown at the bottom.
Full Manhattan for grid location